The Exelixis Lab


Enabling Research in Evolutionary Biology

SATIVA: Semi-Automatic Taxonomy Improvement and Validation Algorithm

About

SATIVA is a pipeline that uses Evolutionary Placement Algorithm (EPA) to identify taxonomically mislabeled sequences and suggest corrections.

Download

Get the most up-to-date SATIVA version from github.

Documentation

Please refer to the source code repository for usage instructions.

GUI

SATIVA is integrated with the most recent (unstable) version of ARB software. The graphical interface of ARB can be used to select input sequences and to display identified mislabels directly in the tree.

Currently, you can either use development builds or compile ARB from source.

User Support

Please send all your questions and feature requests regarding SATIVA to the RAxML google group.

Publication

Coming soon.